BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G04LP1|AL427203
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1342 1837 0.0
>3x_Contig1342
Length = 7422
Score = 1837 bits (921), Expect = 0.0
Identities = 972/987 (98%), Gaps = 6/987 (0%)
Strand = Plus / Minus
Query: 1 tgtcgcattggttatattcgatatcgcaatgaagaatctgggcamatcttttgtcaagaa 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1480 tgtcgcattggttatattcgatatcgcaatgaagaatctgggcacatcttttgtcaagaa 1421
Query: 61 acatcaaggatactacgccgttaccaattcgcaagtcgatgaagagctcagcagaaacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 acatcaaggatactacgccgttaccaattcgcaagtcgatgaagagctcagcagaaacgt 1361
Query: 121 tatgtcctacctgtttgatagatgcctcgagtatatcaacttattttcggaatttcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 tatgtcctacctgtttgatagatgcctcgagtatatcaacttattttcggaatttcaaga 1301
Query: 181 tttaaaaagagaatatctgataaatcwcgtattgcaatggctaaaggacgaacattataa 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1300 tttaaaaagagaatatctgataaatcacgtattgcaatggctaaaggacgaacattataa 1241
Query: 241 tatttcccttgagaaaagtatgccagavaaatatgtggaattattattgcatgatgttac 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1240 tatttcccttgagaaaagtatgccagaaaaatatgtggaattattattgcatgatgttac 1181
Query: 301 attaaatatcaaattcatgcctgccggcgaattaaacatcgacagtctccaattgtcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 attaaatatcaaattcatgcctgccggcgaattaaacatcgacagtctccaattgtcctt 1121
Query: 361 caaaaagtattctgcatacatcagcaaattagatgagacgaatgccaaacaacttactac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 caaaaagtattctgcatacatcagcaaattagatgagacgaatgccaaacaacttactac 1061
Query: 421 attatattctggttatttgacccaacatctattatccaatatggataaatctgattcgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 attatattctggttatttgacccaacatctattatccaatatggataaatctgattcgaa 1001
Query: 481 gtatgctattttgaatgctattatcaagaractgtaatgagacactgtatacacattttt 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1000 gtatgctattttgaatgctattatcaagaaactgtaatgagacactgtatacacattttt 941
Query: 541 atgtacatatttgacattaagtagtaaggtaagcmgtggagccaatatttccacagtttt 600
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 940 atgtacatatttgacattaagtagtaaggtaagcagtggagccaatatttccacagtttt 881
Query: 601 atvactctaattaarcccaattctgagavacgaagaaatcatagattctgttggccttcg 660
|| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 880 ataactctaattaaacccaattctgagaaacgaagaaatcatagattctgttggccttcg 821
Query: 661 ttgcctcgatattcaataaatcacgacactgtttcttcgagagttgacctgcagtccgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ttgcctcgatattcaataaatcacgacactgtttcttcgagagttgacctgcagtccgta 761
Query: 721 ttaattctctgaatagtacctctttgatggcaatgtaaggctttggcaaaattttcaacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ttaattctctgaatagtacctctttgatggcaatgtaaggctttggcaaaattttcaacg 701
Query: 781 ttatgcataactgctgttcctcagctgataataattggaaatctgccccatgctgaatgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttatgcataactgctgttcctcagctgataataattggaaatctgccccatgctgaatgt 641
Query: 841 cactgatagtcattagtttcttacgtccacttccttcgttataattttgagcataatcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cactgatagtcattagtttcttacgtccacttccttcgttataattttgagcataatcag 581
Query: 901 cttgcgatctatgggccg-agtagctctataacgggcagtg-tactagatg-agaag-ag 956
|||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 580 cttgcgatctatgggccgaagtagctctataacgggcagtgttactagatgaagaagaag 521
Query: 957 agt-cacttgactt-cmaatctttcca 981
||| |||||||||| | ||||||||||
Sbjct: 520 agtacacttgacttccaaatctttcca 494
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6950
Number of Sequences: 1807
Number of extensions: 6950
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)